Model Overview
Parameters for model reactions
Reaction | Parameter | Value | Units | Distribution
Mode |
Confidence
Interval Factor |
Location
parameter (μ) |
Scale
parameter (σ) |
---|---|---|---|---|---|---|---|
Binding of R2 to OR operator | 0.005−5.8 | 0.15 | 20 | −0.7010 | 1.094 | ||
0.09−0.85 | 0.3 | 3.5 | −0.8890 | 0.5612 | |||
Binding of R2 to OA operator | 0.005−5.8 | 0.15 | 20 | −0.7010 | 1.094 | ||
0.09−0.85 | 0.3 | 3.5 | −0.8890 | 0.5612 | |||
Binding of R2 to A | 10^{3}−10^{6} | Failed to parse (Cannot store math image on filesystem.): 7 \cdot 10^{4} | 10 | 11.9714 | 0.90284 | ||
2 \cdot 10^{4} | 2.5 | 10.0888 | 0.4305 | ||||
Binding of R2 to C | Failed to parse (Cannot store math image on filesystem.): 10^{-2}-10^{-4} | 5 | 1000 | 5.3401 | 1.9315 | ||
3 \cdot 10^{-4}-126 | 1.3 | 100 | 2.4401 | 1.4757 | |||
Binding of A-R2 to OA' operator | 0.005−5.8 | 0.15 | 30 | −0.4648 | 1.1968 | ||
0.09−0.85 | 0.3 | 4 | −0.8323 | 0.6097 | |||
Synthesis of C | 0.003−0.01 | 0.005 | 10 | −4.4832 | 0.9028 | ||
Transcription of r | 0.16−8.24 | 0.88 | 10 | 0.6873 | 0.9028 | ||
Transcription of a | 0.11−5.65 | 0.60 | 10 | 0.3043 | 0.9028 | ||
Antisense interaction between r and a | 0.20−89 | 5 | 10 | 2.4246 | 0.9028 | ||
0.006−6 | 0.6 | 10 | 0.3043 | 0.9028 | |||
Translation of R | 0.165−5.86 | 0.89 | 10 | 0.6873 | 0.9028 | ||
Translation of A | 0.11−4 | 0.61 | 10 | 0.3208 | 0.9028 | ||
Formation of homo-dimer R2 | 35.3−114 | 30 | 30 | 4.8335 | 1.1968 | ||
2.12−6.84 | 2 | 30 | 2.1255 | 1.1968 | |||
Degradation of r | 0.03−0.4 | 0.15 | 3 | −1.6927 | 0.5229 | ||
Degradation of R | Failed to parse (Cannot store math image on filesystem.): 1.62 \cdot 10^{-3} | 100 | −4.2475 | 1.4757 | |||
Degradation of R2 | Failed to parse (Cannot store math image on filesystem.): 1.62 \cdot 10^{-3} | 100 | −4.2475 | 1.4757 | |||
Degradation of a | 0.03−0.4 | 0.15 | 3 | −1.6927 | 0.5229 | ||
Degradation of A | Failed to parse (Cannot store math image on filesystem.): 1.62 \cdot 10^{-3} | 100 | −4.2475 | 1.4757 | |||
Degradation of C | Failed to parse (Cannot store math image on filesystem.): 2.86 \cdot 10^{-4}- 2 \cdot 10^{-2} | 2 \cdot 10^{-4} | 10 | −7.7021 | 0.9028 | ||
Degradation of C2-R2 | Failed to parse (Cannot store math image on filesystem.): 1.62 \cdot 10^{-3} | 100 | −4.2475 | 1.4757 | |||
Degradation of A-R2 | Failed to parse (Cannot store math image on filesystem.): 1.62 \cdot 10^{-3} | 100 | −4.2475 | 1.4757 | |||
Degradation of r-a | 0.35−34.7 | 5 | 6 | 2.1670 | 0.7467 | ||
Diffusion of C and Ce | 0.1−24 | 8 | 2 | 2.1267 | 0.2174 | ||
Degradation of Ce | Failed to parse (Cannot store math image on filesystem.): 2.86 \cdot 10^{-4}- 2 \cdot 10^{-2} | 2 \cdot 10^{-4} | 10 | −7.7021 | 0.9028 | ||
Cellular growth | Failed to parse (PNG conversion failed; check for correct installation of latex and dvipng (or dvips + gs + convert)): μ | 0.0004−0.011 | 0.001 | 10 | −6.0926 | 0.9028 |
Parameters for cell colony growth
Parameter | Value | Units |
---|---|---|
Failed to parse (PNG conversion failed; check for correct installation of latex and dvipng (or dvips + gs + convert)): τ | ||
Failed to parse (PNG conversion failed; check for correct installation of latex and dvipng (or dvips + gs + convert)): λ | ||