Difference between revisions of "Degradation of C"
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| <math>min^{-1}</math> | | <math>min^{-1}</math> | ||
| Degradation rate of acyl-homoserine lactone (AHL) | | Degradation rate of acyl-homoserine lactone (AHL) | ||
| − | | The assumption that the degradation of SCB1 is slower than AHL is made, as | + | | The assumption that the degradation of SCB1 is slower than |
| + | AHL is made, as described in Takano(2006)<ref name="Takano2006"> E. Takano. ''γ-butyrolactones: Streptomyces signalling molecules regulating antibiotic production and differentiation.'' Current Opinion in Microbiology, 9(3):287–294, 2006.</ref> | ||
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Revision as of 22:45, 28 September 2015
The SCB1 protein (C) degrades.
Contents
Chemical equation
Rate equation
![r= d_{C}\cdot[C]](/wiki/images/math/f/c/b/fcb71209c990f6af04af87f99fed6a0f.png)
Parameters
The parameter of this reaction is the degradation rate of C (
).
| Name | Value | Units | Origin | Remarks |
|---|---|---|---|---|
|
|
 [1]
|
|
Degradation rate of acyl-homoserine lactone (AHL) | The assumption that the degradation of SCB1 is slower than
AHL is made, as described in Takano(2006)[2] |
Parameters with uncertainty
The most plausible parameter value for the is decided to be 
and the confidence interval 
. This means that the mode of the PDF is 0.0002 and the range where 95% of the values are found is between 
and 
.
The probability distribution for the parameter, adjusted accordingly in order to reflect the above values, is the following:
The location and scale parameters of the distribution are:
| Parameter | μ | σ |
|---|---|---|
|
|
|
|
References
- ↑ S. Basu, Y. Gerchman, C. H. Collins, F. H. Arnold & R. Weiss. A synthetic multicellular system for programmed pattern formation. Nature 434, 1130-1134, 2005
- ↑ E. Takano. γ-butyrolactones: Streptomyces signalling molecules regulating antibiotic production and differentiation. Current Opinion in Microbiology, 9(3):287–294, 2006.
