Difference between revisions of "Translation of R"

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== Rate equation ==
 
== Rate equation ==
 
In our model we assume that there is an infinite amount of substrate S for the SCB1 synthesis and that the rate of the reaction is dependent only on the concentration of the catalyst A. Therefore, the rate of the reaction is:
 
  
 
<center><math> r= P_{R}\cdot [r]\cdot [R]</math></center>
 
<center><math> r= P_{R}\cdot [r]\cdot [R]</math></center>

Revision as of 05:34, 28 September 2015

The ScbR mRNA (r) is translated into ScbR protein (R).

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Chemical equation

r \rightarrow r + R

Rate equation

 r= P_{R}\cdot [r]\cdot [R]

Parameters

[NOTE TO MARC: The value we have for this is expressed in x/min. We need it to be in min-1. Should we change it?]


The parameter of this reaction is the translation rate of ScbR (P_{R}).

Name Value Units Origin Remarks
P_{R} 1 - 48??  ??

Parameters with uncertainty

The most plausible parameter value for the P_{R} is decided to be  ?? min^{-1} and the confidence interval ??. This means that the mode of the PDF is ?? and the range where 95% of the values are found is between ?? and ?? min^{-1}.

The probability distributions for the parameter, adjusted accordingly in order to reflect the above values, is the following:


The location and scale parameters of the distribution are:

Parameter μ σ
P_{R} ?? ??

References