Difference between revisions of "Transformation of PGH2 to PGI2"
(→Parameters) |
(→Parameters) |
||
Line 105: | Line 105: | ||
|<ref name="Wilhelm2014"> [http://www.nature.com/nature/journal/v509/n7502/pdf/nature13319.pdf M. Wilhelm ''Mass-spectrometry-based draft of the human proteome'' Nature, 2014 509, 582–587]</ref> | |<ref name="Wilhelm2014"> [http://www.nature.com/nature/journal/v509/n7502/pdf/nature13319.pdf M. Wilhelm ''Mass-spectrometry-based draft of the human proteome'' Nature, 2014 509, 582–587]</ref> | ||
|- | |- | ||
+ | |} | ||
+ | |||
+ | {|class="wikitable sortable" | ||
+ | |+ style="text-align: left;" | Gibbs Free Energy Change | ||
+ | |- | ||
+ | ! Value | ||
+ | ! Units | ||
+ | ! Species | ||
+ | ! Notes | ||
+ | ! Reference | ||
+ | |- | ||
+ | |0.04 | ||
+ | |kcal/mol | ||
+ | |Not stated | ||
+ | |Estimated | ||
+ | Enzyme: pgis | ||
+ | Substrate: Arachidonate | ||
+ | Product: PGI2 | ||
+ | pH: 7.3 | ||
+ | ionic strength: 0.25 | ||
+ | |<ref name="MetaCyc”>[http://metacyc.org/META/NEW-IMAGE?type=REACTION&object=PROSTAGLANDIN-I-SYNTHASE-RXN Caspi et al 2014, "The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases," Nucleic Acids Research 42:D459-D471]</ref> | ||
|} | |} | ||
Revision as of 15:24, 18 August 2016
Contents
Reaction
Chemical equation
Rate equation
Parameters
Value | Units | Species | Notes | Reference |
---|---|---|---|---|
1.33E-02 ± 1.40E-03 | Human | Expression Vector: Bovine Endothelial and Aorta Cells
Enzyme: Human PGIS pH:7.4 Temperature: 23 |
[1] | |
9.00E-03 ± 5.00E-03 | Bovine | Expression Vector: Bovine Endothelial and Aorta Cells
Enzyme: Bovine PGIS pH:7.4 Temperature: 24 |
[2] |
Value | Units | Species | Notes | Reference |
---|---|---|---|---|
147 ± 45 | per minute | Cattle | Expression Vector: E. Coli
Enzyme: Bovine PGIS pH:7.4 Temperature: 24 |
[2] |
Value | Units | Species | Notes | Reference |
---|---|---|---|---|
412 | Human | Expression Vector: Urinary bladder
Enzyme: PGIS pH: 7.5 Temperature: 37 °C |
[3] | |
206 | Human | Expression Vector: Lung
Enzyme: PGIS pH: 7.5 Temperature: 37 °C |
[3] | |
60.1 | Human | Expression Vector: Esophagus
Enzyme: PGIS pH: 7.5 Temperature: 37 °C |
[3] | |
9.93 | Human | Expression Vector: Oral Cavity
Enzyme: PGIS pH: 7.5 Temperature: 37 °C |
[4] |
Value | Units | Species | Notes | Reference |
---|---|---|---|---|
0.04 | kcal/mol | Not stated | Estimated
Enzyme: pgis Substrate: Arachidonate Product: PGI2 pH: 7.3 ionic strength: 0.25 |
[5] |
References
- ↑ H. C. Yeh, P. Y. Hsu, Characterization of heme environment and mechanism of peroxide bond cleavage in human prostacyclin synthase. Biochim Biophys Acta. 2005 Dec 30;1738(1-3):121-32.
- ↑ 2.0 2.1 Hara S. , Isolation and molecular cloning of prostacyclin synthase from bovine endothelial cells. J Biol Chem. 1994 Aug 5;269(31):19897-903. Cite error: Invalid
<ref>
tag; name "Hara1994" defined multiple times with different content - ↑ 3.0 3.1 3.2 M. Kim A draft map of the human proteome Nature, 2014 509, 575–581
- ↑ M. Wilhelm Mass-spectrometry-based draft of the human proteome Nature, 2014 509, 582–587
- ↑ Caspi et al 2014, "The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases," Nucleic Acids Research 42:D459-D471