Difference between revisions of "Serine out"
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Revision as of 11:35, 15 May 2014
This reaction describes the utilization of the endproduct Serine in other pathways.
Contents
Reaction equation
Rate equation
Simple reversible mass action rate law is used.
Parameters
- For Transport reactions it is presumed to be at equilibrium, such that and .
Parameter | Value | Units | Organism | Remarks |
---|---|---|---|---|
0.0103 [1] | Escherichia coli | |||
0.0103 |
Parameters with uncertainty
- The transport rates have been modelled using mass action kinetics (i.e., as non-saturable, non-enzymatic reactions). No information is available about the uncertainty of these parameters. As these parameters are strictly positive, they are sampled using a log-normal distribution as are and values. The means of are set to the value reported in Turnaev (2006) et al. [1] for the fixed-parameter model. The reaction is presumed to be at equilibrium, such that and . The sampling of the parameters are done in a way so that it ranges between to allow a large exploration of the parameter space.
Parameter | Value | Organism | Remarks |
---|---|---|---|
Sampled between 0.0000103 and 10.3 | |||
Sampled between 0.0000103 and 10.3 |