Difference between revisions of "Hydroxymethyglutaryl-CoA synthase (HMGS)"
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+ | == HMGS Parameter Values == | ||
{| class="wikitable" | {| class="wikitable" | ||
|+ List of Km values for Acetyl-CoA in HMGS reaction | |+ List of Km values for Acetyl-CoA in HMGS reaction | ||
Line 88: | Line 89: | ||
| Gene from E. faecalis, expressed in E. coli, pH 9.8, 37C. | | Gene from E. faecalis, expressed in E. coli, pH 9.8, 37C. | ||
| <ref name=Sutherlin2002>Sutherlin, A., et al. (2002). "Enterococcus faecalis 3-Hydroxy-3-methylglutaryl coenzyme A synthase, an enzyme of isopentenyl diphosphate biosynthesis." Journal of Bacteriology 184(15): 4065-4070.</ref> | | <ref name=Sutherlin2002>Sutherlin, A., et al. (2002). "Enterococcus faecalis 3-Hydroxy-3-methylglutaryl coenzyme A synthase, an enzyme of isopentenyl diphosphate biosynthesis." Journal of Bacteriology 184(15): 4065-4070.</ref> | ||
+ | |} | ||
+ | |||
+ | {| class="wikitable" | ||
+ | |+ List of Km values for Acetoacetyl-CoA | ||
+ | ! Value | ||
+ | ! SD or SEM | ||
+ | ! Unit | ||
+ | ! Weight | ||
+ | ! Where did I get that? | ||
+ | ! Notes | ||
+ | ! Reference | ||
+ | |- | ||
+ | | style="width: 5%;" |0.35 | ||
+ | | style="width: 5%;" |NaN | ||
+ | | style="width: 5%;" |μM | ||
+ | | style="width: 5%;" |4 | ||
+ | | style="width: 20%;" |[[File:Menahan_1981_HMGS.png|450px|Km values for Acetyl-CoA and Acetoacetyl-CoA]] | ||
+ | | style="width: 10%;" |Gene from Gallus gallus, assay pH 8.2, 20°C. | ||
+ | | style="width: 5%;" |<ref name=Menahan1981>Menahan, L. A., et al. (1981). "Interrelationships between 3-Hydroxy-3-Methylglutaryl-CoA synthase, acetoacetyl-COA and ketogenesis." Eur. J. Biochem. 119: 287-294.</ref> | ||
+ | |- | ||
+ | | 0.4 | ||
+ | | NaN | ||
+ | | μM | ||
+ | | 64 | ||
+ | | [[File:Middleton_1972_HMGS.png|450px|Km values for Acetyl-CoA and Acetoacetyl-CoA]] | ||
+ | | pH 8.0; 30°C, gene from Saccharomyces cerevisiae, kinetics measured at different pHs. Uncertainty measurement not mentioned. | ||
+ | | <ref name=Middleton1972 /> | ||
+ | |- | ||
+ | | 3.2 | ||
+ | | NaN | ||
+ | | μM | ||
+ | | 64 | ||
+ | | [[File:Middleton_1972_HMGS.png|450px|Km values for Acetyl-CoA and Acetoacetyl-CoA]] | ||
+ | | pH 8.9; 30°C, gene from Saccharomyces cerevisiae, kinetics measured at different pHs. Uncertainty measurement not mentioned. | ||
+ | | <ref name=Middleton1972 /> | ||
+ | |- | ||
+ | | 0.5 | ||
+ | | NaN | ||
+ | | μM | ||
+ | | 16 | ||
+ | | [[File:Cabano_1997_HMGS.png|450px|Km values for Acetyl-CoA and Acetoacetyl-CoA]] | ||
+ | | pH 8.5, 30C, 2 cytosolic HMG-CoA synthase genes from Blatella germanica, HMGS-1 and HMGs-2 described, HMGS-1 cloned in expression vector pSBLA1 and overexpressed in Escherichia coli BL21DE3 pLys S; intronless gene, encodes for an active enzyme able to complement , eukaryotic Mev-1 cells. Measured at 30°C, initiated by adding 0.2-0.6 microgram of protein, final volume 400 microlitre, pH 7.0- 8.5. | ||
+ | | <ref name=Cabano1997 /> | ||
+ | |- | ||
+ | | 0.85 | ||
+ | | naN | ||
+ | | μM | ||
+ | | 4 | ||
+ | | [[File:Misra_1996_HMGS.png|450px|Km values for Acetyl-CoA and Acetoacetyl-CoA]] | ||
+ | | Avian enzyme. wildtype and mutants; expression vector pET-3d, cloned and expressed in Escherichia coli BL21 (DE3), pH 8.2, temperature not mentioned. | ||
+ | | <ref name=Misra1996 /> | ||
+ | |- | ||
+ | | 1.19 | ||
+ | | 0.12 | ||
+ | | μM | ||
+ | | 16 | ||
+ | | [[File:Chun_2000_HMGS.png|450px|Km values for Acetyl-CoA and Acetoacetyl-CoA]] | ||
+ | | Gene from E. coli, expressed in E. coli, pH 8.2, 30°C | ||
+ | | <ref name=Chun2000 /> | ||
+ | |- | ||
+ | | 1.4 | ||
+ | | 0.2 | ||
+ | | μM | ||
+ | | 16 | ||
+ | | [[File:VanNice_2013_HMGS.png|450px|Km values for Acetyl-CoA and Acetoacetyl-CoA]] | ||
+ | | Gene from ''H. volcanii'', expressed in ''H. volcanii''. pH 8.0, 30°C | ||
+ | | <ref name=VanNice2013 /> | ||
+ | |- | ||
+ | | 10 | ||
+ | | NaN | ||
+ | | μM | ||
+ | | 4 | ||
+ | | [[File:Sutherlin_2002_HMGS.png|450px|Km values for Acetyl-CoA and Acetoacetyl-CoA]] | ||
+ | | Gene from ''E. faecalis'', expressed in ''E. coli'', pH 9.8, 37C. | ||
+ | | <ref name=Sutherlin2002 /> | ||
|} | |} | ||
==References== | ==References== | ||
{{Reflist}} | {{Reflist}} |
Revision as of 09:46, 14 June 2019
HMGS Parameter Values
Value | SD or SEM | Unit | Weight | Where did I get that? | Notes | Reference |
---|---|---|---|---|---|---|
43 | NaN | μM | 8 | style="width: 10%;"Gene from Brassica juncea (indian mustard) and expressed in E. coli. pH 8.5, 35°C. | [1] | |
14 | NaN | μM | 64 | pH 8.0; 30°C, gene from Saccharomyces cerevisiae | [2] | |
18 | NaN | μM | 64 | pH 8.9; 30°C, gene from Saccharomyces cerevisiae | [2] | |
15.3 | NaN | μM | 64 | Km values for Acetyl-CoA and Acetoacetyl-CoA | pH 8.5, 30C, 2 cytosolic HMG-CoA synthase genes from Blatella germanica (cockroach), HMGS-1 and HMGS-2 described, HMGS-1 cloned in expression vector pSBLA1 and overexpressed in Escherichia coli BL21DE3 pLys S; intronless gene, encodes for an active enzyme able to complement , eukaryotic Mev-1 cells. Measured at 30°C, initiated by adding 0.2-0.6 microgram of protein, final volume 400 microlitre, pH 7.0- 8.5. | [3] |
50 | μM | 16 | from chicken liver, pH 8.2, 30C, measured using spectrophometric assay. | [4] | ||
50 | 6 | μM | 16 | Gene from H. volcanii, expressed in H. volcanii. pH 8.0, 30C. Uncertainty measured as SEM. | [5] | |
270 | NaN | μM | 16 | Gene from Avian liver, expressed in E. coli, pH 8.2, 30°C | [6] | |
290 | 22 | μM | 16 | gene from E. coli, expressed in E. coli, pH 8.2, 30C. Uncertainty measured as SE. | [7] | |
294 | NaN | μM | 16 | avian enzyme;wildtype and mutants; expression vector pET-3d, cloned and expressed in Escherichia coli BL21 (DE3), pH 8.2, temperature not mentioned. | [8] | |
350 | NaN | μM | 4 | Gene from E. faecalis, expressed in E. coli, pH 9.8, 37C. | [9] |
Value | SD or SEM | Unit | Weight | Where did I get that? | Notes | Reference |
---|---|---|---|---|---|---|
0.35 | NaN | μM | 4 | Gene from Gallus gallus, assay pH 8.2, 20°C. | [10] | |
0.4 | NaN | μM | 64 | pH 8.0; 30°C, gene from Saccharomyces cerevisiae, kinetics measured at different pHs. Uncertainty measurement not mentioned. | [2] | |
3.2 | NaN | μM | 64 | pH 8.9; 30°C, gene from Saccharomyces cerevisiae, kinetics measured at different pHs. Uncertainty measurement not mentioned. | [2] | |
0.5 | NaN | μM | 16 | pH 8.5, 30C, 2 cytosolic HMG-CoA synthase genes from Blatella germanica, HMGS-1 and HMGs-2 described, HMGS-1 cloned in expression vector pSBLA1 and overexpressed in Escherichia coli BL21DE3 pLys S; intronless gene, encodes for an active enzyme able to complement , eukaryotic Mev-1 cells. Measured at 30°C, initiated by adding 0.2-0.6 microgram of protein, final volume 400 microlitre, pH 7.0- 8.5. | [3] | |
0.85 | naN | μM | 4 | Avian enzyme. wildtype and mutants; expression vector pET-3d, cloned and expressed in Escherichia coli BL21 (DE3), pH 8.2, temperature not mentioned. | [8] | |
1.19 | 0.12 | μM | 16 | Gene from E. coli, expressed in E. coli, pH 8.2, 30°C | [7] | |
1.4 | 0.2 | μM | 16 | Gene from H. volcanii, expressed in H. volcanii. pH 8.0, 30°C | [5] | |
10 | NaN | μM | 4 | Gene from E. faecalis, expressed in E. coli, pH 9.8, 37C. | [9] |
References
Template:Reflist- ↑ Nagegowda, D. A., et al. (2004). "Brassica juncea 3-hydroxy-3-methylglutaryl (HMG)-CoA synthase 1: expression and characterization of recombinant wild-type and mutant enzymes." Biochem. J. 383: 517-527.
- ↑ 2.0 2.1 2.2 2.3 Middleton, B. (1972). "The kinetic mechanism of 3-Hydroxy-3-methylglutaryl-Coenzyme A Synthase from baker's yeast." Biochem. J. 126: 35-47.
- ↑ 3.0 3.1 Cabano, J., et al. (1997). "Catalytic properties of recombinant 3-Hydroxy-3-methylglutaryl Coenzyme A synthase-1 from Blatella Germanica." Insect Biochem. Molec. Biol. 27(6): 499-505.
- ↑ Reed, W. D. and M. D. Lane (1975). "Mitochondrial 3-hydroxy-3-methylglutaryl-CoA synthase from chicken liver." Methods in Enzymology 35: 155-160.
- ↑ 5.0 5.1 VanNice, J. C., et al. (2013). "Expression in Haloferax volcanii of 3-Hydroxymethylglutaryl Coenzyme A synthase facilitates isolation and characterization of the active form of a key enzyme required for polyisoprenoid cell membrane biosynthesis in halophilic archaea." Journal of Bacteriology 195(17): 3854-3862.
- ↑ Misra, I., et al. (1993). "Avian 3-hydroxy-3-methylglutaryl-CoA synthase." The Journal of Biological Chemistry 288(16): 12129-12135.
- ↑ 7.0 7.1 Chun, K. Y., et al. (2000). "3-hydroxy-3-methylglutaryk-CoA synthase: participation of invariant acidic residues in formation of the acetyl-S-enzyme reaction intermediate." Biochemistry 39: 14670-14681.
- ↑ 8.0 8.1 Misra, I. and H. M. Miziorko (1996). "Evidence for the interaction of avian 3-hydroxy-3-methylglutaryl-CoA synthase histidine 264 with acetoacetyl-CoA." Biochemistry 35: 9610-9616.
- ↑ 9.0 9.1 Sutherlin, A., et al. (2002). "Enterococcus faecalis 3-Hydroxy-3-methylglutaryl coenzyme A synthase, an enzyme of isopentenyl diphosphate biosynthesis." Journal of Bacteriology 184(15): 4065-4070.
- ↑ Menahan, L. A., et al. (1981). "Interrelationships between 3-Hydroxy-3-Methylglutaryl-CoA synthase, acetoacetyl-COA and ketogenesis." Eur. J. Biochem. 119: 287-294.