Difference between revisions of "Hexokinase"

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Calculating average from these equlibrium constant gives the value of <math>2214.66 \pm 2332.60</math>
  
 
==References==
 
==References==
 
<references/>
 
<references/>

Revision as of 12:58, 24 June 2014

The enzyme hexokinase phosphorylates (adds a phosphate group to) glucose in the cell's cytoplasm. In the process, a phosphate group from Adenosine triphosphate (ATP) is transferred to glucose producing glucose 6-phosphate (Glc6P).

Chemical equation

Glucose_{in} + ATP \rightleftharpoons Glc6P + ADP

Rate equation

Without inhibition

Random Bi-Bi Michaelis Menten is used.[1]

 v = \frac{\frac{V_{mf}}{Km_{Glucose_{in}}K_{ATP}}\Big( [Glucose_{in}][ATP] - \frac{[Glc6P][ADP]}{K_{eq}} \Big)}{1 + \frac{[Glucose_{in}]}{Km_{Glucose_{in}}} + \frac{[ATP]}{K_{ATP}} + \frac{[Glucose_{in}][ATP]}{Km_{Glucose_{in}}K_{ATP}} + \frac{[Glc6P]}{K_{Glc6P}} + \frac{[ADP]}{K_{ADP}} +\frac{[Glc6P][ADP]}{K_{Glc6P}K_{ADP}} + \frac{[Glucose_{in}][ADP]}{K_{Glucose_{in}}K_{ADP}} +\frac{[Glc6P][ATP]}{K_{Glc6P}K_{ATP}} }

With allosteric inhibition

Hexokinase is allosterically inhibited by Glc6P [2]. The rate law taking into account this inhibition is

 \frac{V_{mf}* \frac{[Glucose]*[ATP]}{Km_{Glucose}*Km_{ATP}} }{ \left(1 + \frac{[Glc6P]}{Ki_{Glc6P}} \right)* \left( 1 + \frac{[Glucose]}{Km_{Glucose}} \right) + \frac{[ATP]}{Km_{ATP}} + \frac{[Glucose]*[ATP]}{Km_{Glucose}*Km_{ATP}} }

Parameters

Without inhibition

Parameter Value Units Organism Remarks
V_{mf} 0.04 [3]  mM \times min^{-1} HeLa cell line
K_{eq} 651[4]
Km_{Glucose} 0.1[1] mM
Km_{ATP} 1.1[1] mM
Km_{Glc6P} 2e^{-002}[1] mM
Km_{ADP} 3.5[1] mM

With inhibition

Parameter Value Units Organism Remarks
V_{mf} 0.04 [3]  mM \times min^{-1} HeLa cell line
Km_{Glucose} 0.1[1] mM
Km_{ATP} 1.1[1] mM
Ki_{Glc6P} 0.02[2] mM

Parameters with uncertainty

Hexokinase isoenzyme has been reported to vary in different developmental and metabolic status of the cell. In mammalian tissues four isoenzymes of Hexokinase is present [5]. Hexokinase-II has been found to be overexpressed in several first growith cancer cells [3]. Therefore in our model we have considered only the Hexokinase-II kinetic parameter values.

Parameter Value Units Organism Remarks
V_{mf} Failed to parse (Cannot store math image on filesystem.): 0.02 \pm 0.006 (n=4)[3] U\cdot(\text{mg protein})^{-1} HeLA cell line
Km_{Glucose} 0.37 \pm 0.003 (n=5)[6] mM SNU449 cell (Human Liver Tissue)
Km_{ATP} 0.81 \pm 0.11 (n=5)[6] mM
Ki_{Glc6P} 0.24 \pm 0.06 (n=5)[6] mM

Equilibrium constant

Equilibrium constant Conditions Source
4908 pH=7, T=25°C Voet et al.[7] from Newshole et al. (1973) [8]:

\Delta G' = - 20.9\ kJ.mol^{-1}, Keq = exp(-\frac{\Delta G'}{RT}) = exp(\frac{20900}{8.31*298.15}) \approx 4908

846 pH=7, T=25°C Lehninger, (1975)[9] p 553:

\Delta G' = - 16.7\ kJ.mol^{-1}, Keq = exp(-\frac{\Delta G'}{RT}) = exp(\frac{16700}{8.31*298.15}) \approx 845.8

890 pH=7, T=25°C Lehninger, (1975)[10] p 396

Calculating average from these equlibrium constant gives the value of 2214.66 \pm 2332.60

References

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Marín-Hernández A, Gallardo-Pérez JC, Rodríguez-Enríquez S et al (2011) Modeling cancer glycolysis. Biochim Biophys Acta 1807:755–767 (doi)
  2. 2.0 2.1 Wilson J E (2003). Isozymes of mammalian hexokinase: structure, subcellular localization and metabolic function. Journal of Experimental Biology, 206, pp. 2049–2057 (doi)
  3. 3.0 3.1 3.2 3.3 Marín-Hernández A , Rodríguez-Enríquez S, Vital-González P A, et al. (2006). Determining and understanding the control of glycolysis in fast-growth tumor cells. Flux control by an over-expressed but strongly product-inhibited hexokinase. FEBS J., 273 , pp. 1975–1988(doi) Cite error: Invalid <ref> tag; name "Hernandez_2006" defined multiple times with different content
  4. Arbitrary value
  5. Adams V, Kempf W, Hassam S, Briner J. (1995), Determination of hexokinase isoenzyme I and II by RT-PCR: increased hexokinase II isoenzyme in human renal cell carcinoma. J Biochem Mol Med 1995;54:53–58.
  6. 6.0 6.1 6.2 Ahn, K.J.; Kim, J.; Yun, M.; Park, J.H.; Lee, J.D.(2009), Enzymatic properties of the N- and C-terminal halves of human hexokinase II, BMB Rep. 42, 350-355.
  7. Voet, D., Voet., J.G. and Pratt, C. W. (1999) Fundamentals of biochemistry, Wiley
  8. Newshole, E.A. and Stuart, C. (1973) Regulation in Metabolism, Wiley
  9. David L. Nelson, Michael M. Cox (2008), Lehninger Principles of Biochemistry (5th edn), W. H. Freeman and Company
  10. Lehninger, A.L. (1975) Biochemistry (2nd edn), Worth