Difference between revisions of "Degradation of Ce"
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| Degradation rate of acyl-homoserine lactone (AHL) | | Degradation rate of acyl-homoserine lactone (AHL) | ||
| The assumption that the degradation of SCB1 is slower than | | The assumption that the degradation of SCB1 is slower than | ||
− | AHL is made, as | + | AHL is made, as described in Takano(2006)<ref name="Takano2006"> E. Takano. ''γ-butyrolactones: Streptomyces signalling molecules regulating antibiotic production and differentiation.'' Current Opinion in Microbiology, 9(3):287–294, 2006.</ref> |
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Revision as of 22:44, 28 September 2015
The extracellular SCB1 protein (Ce) degrades.
Contents
Chemical equation
Rate equation
Parameters
The parameter of this reaction is the degradation rate of Ce (), which is assumed to be the same as with the cellular SCB1 (C).
Name | Value | Units | Origin | Remarks |
---|---|---|---|---|
[1] | Degradation rate of acyl-homoserine lactone (AHL) | The assumption that the degradation of SCB1 is slower than
AHL is made, as described in Takano(2006)[2] |
Parameters with uncertainty
The most plausible parameter value for the is decided to be and the confidence interval . This means that the mode of the PDF is 0.0002 and the range where 95% of the values are found is between and .
The probability distribution for the parameter, adjusted accordingly in order to reflect the above values, is the following:
The location and scale parameters of the distribution are:
Parameter | μ | σ |
---|---|---|
References
- ↑ S. Basu, Y. Gerchman, C. H. Collins, F. H. Arnold & R. Weiss. A synthetic multicellular system for programmed pattern formation. Nature 434, 1130-1134, 2005
- ↑ E. Takano. γ-butyrolactones: Streptomyces signalling molecules regulating antibiotic production and differentiation. Current Opinion in Microbiology, 9(3):287–294, 2006.