Degradation of A-R2

From ISMOC
Revision as of 21:41, 28 September 2015 by Areti ts (talk | contribs) (Created page with "The ScbR-ScbA protein complex (AR<sub>2</sub>) degrades. <imagemap> Image:Flowchart.png|150px|right|alt=Go back to overview default Welcome to the In-Silico Model of γ-but...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

The ScbR-ScbA protein complex (AR2) degrades.

Go back to overview
About this image

Chemical equation

AR_{2}\rightarrow \varnothing

Rate equation

 r= d_{AR}\cdot[AR_{2}]

Parameters

The parameter of this reaction is the degradation rate of AR2 (d_{AR}).

Name Value Units Origin Remarks
d_{AR} 0.000833-0.001667 [1] min^{-1} Degradation rates of proteins in S. coelicolor

based on radioactive decay

Parameters with uncertainty

The most plausible parameter value for the d_{AR} is decided to be  0.00118 min^{-1} and the confidence interval  1.41 . This means that the mode of the PDF is 0.00118 and the range where 95% of the values are found is between 0.0008369 and 0.00167 min^{-1}.

The probability distribution for the parameter, adjusted accordingly in order to reflect the above values, is the following:

DR.png

The location and scale parameters of the distribution are:

Parameter μ σ
d_{AR} -6.7120 0.174

References

  1. Trötschel C, Albaum SP, Poetsch A. Proteome turnover in bacteria: current status for Corynebacterium glutamicum and related bacteria. Microbial biotechnology. 2013;6(6):708-719.