Phosphoserine amino-transferase

From ISMOC
Revision as of 17:21, 26 March 2014 by Galib36 (talk | contribs) (Parameter values)
Jump to: navigation, search

This enzyme catalyzes reaction to convert Phosphohydroxypyruvate (PHP) to phosphoserine (PSER).

Chemical equation

PHP \rightleftharpoons PSER

Rate equation

Special rate equation [1] is used.

 \frac{serC * KcatC * \frac{[PHP]}{Kc_{PHP}} }{ 1 + \frac{[PHP]}{Kc_{PHP}} + \frac{[PSER]}{Kc_{PSER}} }

Parameter values

Parameter Value Units Organism Remarks
serC 0.1 [2] mM Escherichia coli
KcatC 1.75 [3] 1/s
Kc_{PHP} 0.0015[3] mM
Kc_{PSER} 0.0017[3] mM

References

  1. Smallbone K, Stanford NJ (2013). Kinetic modeling of metabolic pathways: Application to serine biosynthesis. In: Systems Metabolic Engineering, Humana Press. pp. 113–121
  2. Turnaev II, Ibragimova SS, Usuda Y et al (2006). Mathematical modeling of serine and glycine synthesis regulation in Escherichia coli. Proceedings of the fifth international conference on bioinformatics of genome regulation and structure 2:78–83
  3. 3.0 3.1 3.2 Drewke C, Klein M, Clade D et al (1996) 4-O-phosphoryl-L-threonine, a substrate of the pdxC(serC) gene product involved in vitamin B6 biosynthesis. FEBS Lett 390:179–182