Difference between revisions of "Enzyme Parameters"

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== Distributions ==
 
== Distributions ==
  
[[File:EnzymeKcatDistrbutions.jpg|center|500px|caption]]
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[[File:EnzymeKcatDistrbutions.jpg|frame|caption]]
 
[[File:EnzymeKmDistributions.jpg|center|500px]]
 
[[File:EnzymeKmDistributions.jpg|center|500px]]
  
 
== Related Pages ==
 
== Related Pages ==

Revision as of 13:41, 14 June 2016

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Data

Table of enzyme parameters with their respective confidence interval, location and scale parameter. The value for each enzyme parameter is the weighted mode, calculated using literature parameters and the parameter alogirthm described by Breitling, Hawari and Tsigkinopoulou. The algorithm was also used in order to calculate the confidence interval for each data set, the larger the confidence interval, the larger the descrepancy between literature values. The location and scale parameters stated for each parameter describe the log normal distributions which were generated using a two-by-two system of the equations containing the cumulative distribution function (CDF) and the mode. For more details about these calculations please visit Quantification of parameter uncertainty.

Quantifying Parameter Uncertainty
Enzyme Parameter Weighted

Mode

Confidence

Interval

Location

Parameter

Scale

Parameter

12-LOX Km 0.00755 5.83 -4.36 0.727
Kcat 252 1.38 5.56 0.159
15-LOX Km 0.00780 1.78 -4.78 0.278
Kcat 66.6 5.30 4.68 0.700
5-LOX Km 0.00855 4.19 -4.38 0.617
Kcat 1460 1.50 7.29 0.0244
COX-2 Km 0.00368 3.38 -5.32 0.540
Kcat 1640 1.50 7.44 0.199
cPLA2 Km 0.0113 4.21 -4.11 0.618
Kcat 2650 2.63 8.08 0.443
LTA4H Km 0.00230 5.28 -5.59 0.695
Kcat 20.4 3.87 3.36 0.589
LTC4S Km 0.03 6.75 -2.91 0.773
Kcat 1440 1.50 7.29 0.145
PGDS Km 0.0040 10.0 -4.78 0.891
Kcat 158 10.0 5.86 0.891
PGES Km 0.162 1.50 -1.81 0.0825
Kcat 2820 1.50 7.95 0.0610
PGFS Km 0.00340 6.90 -5.08 0.780
Kcat 14.9 10.0 3.50 0.891
PGIS Km 0.0126 1.50 -4.36 0.123
Kcat 125 1.50 4.85 0.159
PHGPx Km 5.56 19.3 2.86 1.07
Kcat 1280 6.31 10.0 0.752
TXAS Km 0.00700 2.45 -4.79 0.415
Kcat 1630 1.50 7.40 0.0740

Distributions

caption
EnzymeKmDistributions.jpg

Related Pages