Difference between revisions of "3-phosphoglycerate kinase"

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     number = {6}
 
     number = {6}
 
}  
 
}  
 
 
 
 
 
@inproceedings{conf_psb_NakamuraYNMH09,
 
  author = {Nakamura, Kazuyuki and Yoshida, Ryo and Nagasaki, Masao and Miyano, Satoru and Higuchi, Tomoyuki},
 
  booktitle = {Pacific Symposium on Biocomputing},
 
  pages = {227-238},
 
  title = {Parameter Estimation of In Silico Biological Pathways with Particle Filtering Towards a Petascale Computing.},
 
  year = 2009
 
}
 
  
 
</bibtex>
 
</bibtex>

Revision as of 11:37, 27 February 2014

Phosphoglycerate kinase (PGK) is an enzyme that catalyzes the reversible transfer of a phosphate group from 1,3-bisphosphoglycerate (1,3-BPG) to ADP producing 3-phosphoglycerate (3-PG) and ATP. Like all kinases it is a transferase.

Chemical equation

 1,3BPG + ADP \rightleftharpoons 3PG + ATP


Rate equation

Random Bi-Bi reversible Michaelis-Menten euation for non-interacting substrates are used .


 \frac{V_{mf}\frac{[1,3BPG][ADP]}{K_{1,3BPG} K_{ADP}} - V_{mr}\frac{[3PG][ATP]}{K_{3PG} K_{ATP}}}{1 + \frac{[1,3BPG]}{K_{1,3BPG}} + \frac{[ADP]}{K_{ADP}} + \frac{[1,3BPG][ADP]}{K_{1,3BPG} K_{ADP}} + \frac{[3PG][ATP]}{K_{3PG} K_{ATP}} + \frac{[3PG]}{K_{3PG}} + \frac{[ADP]}{K_{ADP}} }

Parameter values

Alternative parameter values

Vrizlynn L.L. Thing, Tong-Wei Chua, Ming-Lee Cheong - Modeling cancer glycolysis
Biochimica et Biophysica Acta (BBA) - Bioenergetics 1807(6):755 - 767, Los Alamitos, CA, USA, 11 2011
Bibtex
Author : Vrizlynn L.L. Thing, Tong-Wei Chua, Ming-Lee Cheong
Title : Modeling cancer glycolysis
In : Biochimica et Biophysica Acta (BBA) - Bioenergetics -
Address : Los Alamitos, CA, USA
Date : 11 2011